STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNA1SVoltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1924 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79.
   
 0.990
CACNA2D1
Voltage-dependent calcium channel subunit alpha-2/delta-1.
   
 0.856
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 0.819
CACNB1_0
Voltage-dependent L-type calcium channel subunit beta-1.
  
 0.813
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4.
   
 0.802
CACNA2D2
Voltage-dependent calcium channel subunit alpha-2/delta-2.
   
 0.785
CACNB3
Voltage-dependent L-type calcium channel subunit beta-3.
   
 0.775
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2.
   
 0.775
CACNB1
Voltage-dependent L-type calcium channel subunit beta-1.
   
 0.663
WDR35
WD repeat-containing protein 35.
    
 0.652
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.