STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000019067annotation not available (133 aa)    
Predicted Functional Partners:
WDR43
WD repeat-containing protein 43.
   
 0.988
BMS1
Ribosome biogenesis protein BMS1.
   
 0.980
UTP4
Cirhin.
   
 0.979
PWP2
Periodic tryptophan protein 2.
   
 
 0.979
UTP18
U3 small nucleolar RNA-associated protein 18.
   
 0.978
UTP15
U3 small nucleolar RNA-associated protein 15.
   
 0.975
WDR75
WD repeat-containing protein 75.
   
 0.972
BYSL
Bystin.
   
 
 0.972
UTP6
U3 small nucleolar RNA-associated protein 6.
   
 
 0.969
FCF1
rRNA-processing protein FCF1.
   
 0.967
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.