STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000019597annotation not available (145 aa)    
Predicted Functional Partners:
CEP76
Centrosomal protein.
 
      0.900
PLK1
Serine/threonine-protein kinase PLK.
    
 0.633
CCP110
UPF0505 protein C16orf62.
    
 
 0.546
PLK4
Serine/threonine-protein kinase PLK4.
    
 0.537
ENSLSDP00000007626
annotation not available
    
 0.537
LARGE2
Glycosyltransferase-like protein LARGE2.
      
 0.518
TMED6
Transmembrane emp24 domain-containing protein 6.
      
 0.514
CEP290
Centrosomal protein.
    
 
 0.506
C2CD3
C2 domain-containing protein 3.
     
 0.469
PLK3
Serine/threonine-protein kinase PLK3.
    
 0.468
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.