STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR7LAflatoxin B1 aldehyde reductase member 2. (330 aa)    
Predicted Functional Partners:
NUP133
Nuclear pore complex protein Nup133.
   
 0.741
SEC13
Protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.730
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.728
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.703
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.701
AGXT
Serine--pyruvate aminotransferase.
   
 
  0.635
NCOA5
Nuclear receptor coactivator 5.
    
 0.630
NUP98
Nuclear pore complex protein Nup98-Nup96.
    
 0.630
ENSLSDP00000016603
annotation not available
    
 0.630
KCND2
Potassium voltage-gated channel Shal-related subfamily D member 2.
    
 0.590
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.