STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM20Mitochondrial import receptor subunit TOM20. (204 aa)    
Predicted Functional Partners:
TOMM70
Mitochondrial import receptor subunit TOM70.
   
 0.990
TOMM40L
Mitochondrial import receptor subunit TOM40B.
   
 0.984
TOMM22
Mitochondrial import receptor subunit TOM22.
   
 0.971
TOMM7
Mitochondrial import receptor subunit TOM7.
   
 0.957
USP30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.850
TOMM5
Mitochondrial import receptor subunit TOM5 homolog.
   
 
 0.833
TOMM6
Mitochondrial import receptor subunit TOM6 homolog.
     
 0.823
PINK1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 0.799
SAMM50
Sorting and assembly machinery component 50.
    
 0.797
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 0.775
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.