STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACC1Transmembrane protein 206. (319 aa)    
Predicted Functional Partners:
NENF
Neudesin; Belongs to the cytochrome b5 family.
      
 0.550
MANSC1
MANSC domain-containing protein 1.
      
 0.536
GPR141
Putative G-protein coupled receptor 141.
      
 0.533
TMEM171
Transmembrane protein 171.
      
 0.533
LOC110480432
Uncharacterized protein KIAA1211-like.
      
 0.527
CYB5D2
Neuferricin; Belongs to the cytochrome b5 family.
      
 0.526
LARP1B
La-related protein 1B.
      
 0.513
CCND2
G1/S-specific cyclin-D2; Belongs to the cyclin family.
      
 0.493
JADE1
Protein Jade-1.
      
 0.481
RETREG3
Protein FAM134C.
      
 0.471
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.