Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARSB | ARSG | ENSLSDP00000012697 | ENSLSDP00000021590 | Arylsulfatase B. | Arylsulfatase G. | 0.546 |
ARSB | ARSK | ENSLSDP00000012697 | ENSLSDP00000024340 | Arylsulfatase B. | Arylsulfatase K. | 0.701 |
ARSB | MED14 | ENSLSDP00000012697 | ENSLSDP00000020554 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.596 |
ARSB | MED17 | ENSLSDP00000012697 | ENSLSDP00000000084 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.578 |
ARSB | MED6 | ENSLSDP00000012697 | ENSLSDP00000015146 | Arylsulfatase B. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.581 |
ARSB | SUMF1 | ENSLSDP00000012697 | ENSLSDP00000024298 | Arylsulfatase B. | Sulfatase-modifying factor 1. | 0.638 |
ARSB | SUMF2 | ENSLSDP00000012697 | ENSLSDP00000016759 | Arylsulfatase B. | Sulfatase-modifying factor 2. | 0.565 |
ARSG | ARSB | ENSLSDP00000021590 | ENSLSDP00000012697 | Arylsulfatase G. | Arylsulfatase B. | 0.546 |
ARSG | ARSI | ENSLSDP00000021590 | ENSLSDP00000013615 | Arylsulfatase G. | Arylsulfatase I. | 0.551 |
ARSG | ARSJ | ENSLSDP00000021590 | ENSLSDP00000011055 | Arylsulfatase G. | Arylsulfatase J. | 0.548 |
ARSG | ARSK | ENSLSDP00000021590 | ENSLSDP00000024340 | Arylsulfatase G. | Arylsulfatase K. | 0.638 |
ARSG | GALNS | ENSLSDP00000021590 | ENSLSDP00000007586 | Arylsulfatase G. | N-acetylgalactosamine-6-sulfatase. | 0.432 |
ARSG | MED14 | ENSLSDP00000021590 | ENSLSDP00000020554 | Arylsulfatase G. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.744 |
ARSG | MED17 | ENSLSDP00000021590 | ENSLSDP00000000084 | Arylsulfatase G. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.578 |
ARSG | MED6 | ENSLSDP00000021590 | ENSLSDP00000015146 | Arylsulfatase G. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.710 |
ARSG | SUMF1 | ENSLSDP00000021590 | ENSLSDP00000024298 | Arylsulfatase G. | Sulfatase-modifying factor 1. | 0.714 |
ARSG | SUMF2 | ENSLSDP00000021590 | ENSLSDP00000016759 | Arylsulfatase G. | Sulfatase-modifying factor 2. | 0.633 |
ARSI | ARSG | ENSLSDP00000013615 | ENSLSDP00000021590 | Arylsulfatase I. | Arylsulfatase G. | 0.551 |
ARSI | ARSK | ENSLSDP00000013615 | ENSLSDP00000024340 | Arylsulfatase I. | Arylsulfatase K. | 0.558 |
ARSI | MED14 | ENSLSDP00000013615 | ENSLSDP00000020554 | Arylsulfatase I. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.596 |
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