STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1133 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin-binding family member 2.
    
 0.846
CIB3
Calcium and integrin-binding family member 3.
    
 0.750
CIB1
Calcium and integrin-binding protein 1.
    
 0.750
TMIE
Transmembrane inner ear expressed protein.
   
 
 0.706
SRRM4
Serine/arginine repetitive matrix protein 4.
    
 0.537
ADGRV1
G-protein coupled receptor 98.
    
 
 0.520
SLC52A3
Solute carrier family 52, riboflavin transporter, member 3.
      
 0.516
STOX1
Storkhead-box protein 1.
      
 0.499
WFS1
Wolframin.
    
 
 0.490
LHFPL5
Tetraspan membrane protein of hair cell stereocilia.
   
 
 0.464
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.