STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNE1G1/S-specific cyclin-E1; Belongs to the cyclin family. (384 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.988
RB1
Retinoblastoma-associated protein.
   
 0.987
SKP2
S-phase kinase-associated protein 2.
   
 0.982
CDKN1A
Cyclin-dependent kinase inhibitor 1.
   
 0.981
CDKN1C
Cyclin-dependent kinase inhibitor 1C.
   
 0.981
CDKN1B
Cyclin-dependent kinase inhibitor 1B.
   
 0.981
RBL2
Retinoblastoma-like protein 2.
   
 0.980
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.979
CDK2
Cyclin dependent kinase 2.
   
 0.951
CDK3
Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.951
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.