STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USO1General vesicular transport factor p115. (974 aa)    
Predicted Functional Partners:
STX5
Syntaxin-5.
    
 0.993
GOSR2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.990
RAB1A
Ras-related protein Rab-1A.
   
 0.981
BET1L
Blocked early in transport 1.
    
 0.979
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.975
BET1
BET1.
    
 0.971
SCFD1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.937
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
   
 0.899
YKT6
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.898
GOLGA2
Golgin subfamily A member 2.
   
 0.892
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.