STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSMCE1Non-structural maintenance of chromosomes element 1. (253 aa)    
Predicted Functional Partners:
SMC6
Structural maintenance of chromosomes protein 6.
    
 0.999
NSMCE2
E3 SUMO-protein ligase NSE2.
    
 0.999
SMC5
Structural maintenance of chromosomes protein 5.
    
 0.999
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
LOC110482655
Melanoma-associated antigen G1.
   
 0.998
ENSLSDP00000002875
annotation not available
    
 0.895
ENSLSDP00000003300
annotation not available
    
 0.895
PRAM1
PML-RARA-regulated adapter molecule 1.
    
 0.895
SMC3
Structural maintenance of chromosomes protein.
    
 0.864
SMC1A
Structural maintenance of chromosomes protein 1A.
    
 0.841
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.