STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g22878Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
PC110_g5868
Xanthine dehydrogenase.
     
 0.491
PC110_g2990
Uncharacterized protein.
     
 0.482
PC110_g8861
UDP-glucose 6-dehydrogenase.
     
 0.480
PC110_g15381
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.461
PC110_g9913
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.461
PC110_g8677
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.461
PC110_g6611
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.461
PC110_g10050
Uncharacterized protein.
     
 0.460
PC110_g20936
Uncharacterized protein.
    
 0.455
PC110_g14422
Uncharacterized protein.
    
 0.455
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.