STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g22641Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (232 aa)    
Predicted Functional Partners:
PC110_g11839
Uncharacterized protein.
   
  0.661
PC110_g9833
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
  0.661
PC110_g8829
PPM-type phosphatase domain-containing protein.
   
  0.661
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.645
PC110_g8070
WD_REPEATS_REGION domain-containing protein.
    
 
 0.583
PC110_g23833
Uncharacterized protein.
  
 
 0.532
PC110_g18482
Uncharacterized protein.
  
 
 0.532
PC110_g16997
Uncharacterized protein.
  
 
 0.532
PC110_g13423
Uncharacterized protein.
  
 
 0.532
PC110_g14193
Uncharacterized protein.
  
 
 0.532
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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