STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g23240TYR_PHOSPHATASE_2 domain-containing protein. (115 aa)    
Predicted Functional Partners:
PC110_g7581
Uncharacterized protein.
   
 0.875
PC110_g5988
Uncharacterized protein.
   
 0.850
PC110_g70
Protein kinase domain-containing protein.
    
 
 0.839
PC110_g21095
Uncharacterized protein.
   
 0.829
PC110_g12681
Serine/threonine-protein kinase 38-like.
   
 0.829
PC110_g6896
Uncharacterized protein.
   
 0.829
PC110_g5044
Uncharacterized protein.
    
 
 0.807
PC110_g16810
WD_REPEATS_REGION domain-containing protein.
   
 0.797
PC110_g14651
Protein FIZZY-RELATED 2.
   
 0.797
PC110_g12028
Uncharacterized protein.
   
 0.797
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.