STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g20635Aldo_ket_red domain-containing protein. (219 aa)    
Predicted Functional Partners:
PC110_g14792
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 0.732
PC110_g14082
Tryptophan synthase beta chain.
    
  0.649
PC110_g5031
Uncharacterized protein; Belongs to the TrpA family.
    
  0.649
PC110_g15239
Uncharacterized protein.
    
 0.620
PC110_g762
Uncharacterized protein.
   
 0.538
PC110_g4755
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.533
PC110_g3785
Uncharacterized protein.
    
 0.525
PC110_g1673
Ion_trans domain-containing protein.
    
 0.525
PC110_g15438
Uncharacterized protein.
    
  0.516
PC110_g9553
Ion_trans domain-containing protein.
    
  0.516
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.