STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g20532Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
PC110_g1730
Germinal center kinase 3.
    
 0.826
PC110_g17278
Protein kinase domain-containing protein.
    
 
 0.704
PC110_g4544
Serine/threonine-protein kinase.
    
 
 0.704
PC110_g933
Uncharacterized protein.
    
 
 0.704
PC110_g11486
Uncharacterized protein.
     
 0.651
PC110_g3456
AMPKBI domain-containing protein.
     
 0.634
PC110_g20868
Protein kinase domain-containing protein.
    
 0.583
PC110_g19787
Protein kinase domain-containing protein.
    
 0.583
PC110_g16260
Protein kinase domain-containing protein.
    
 0.583
PC110_g14184
CBL-interacting protein kinase 32; Belongs to the protein kinase superfamily.
    
 0.583
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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