STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g19750Aa_trans domain-containing protein. (144 aa)    
Predicted Functional Partners:
PC110_g10317
Uncharacterized protein.
    
 0.580
PC110_g1712
Uncharacterized protein.
    
 0.580
PC110_g3504
Robl_LC7 domain-containing protein.
    
  0.576
PC110_g15006
Ras-related GTP-binding protein A.
   
 0.552
PC110_g9159
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.542
PC110_g14648
Ras-related GTP-binding protein D.
    
 0.514
PC110_g4523
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.453
PC110_g10671
DAO domain-containing protein.
   
 
 0.440
PC110_g18168
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
  0.437
PC110_g10321
Phosphoglucomutase-2.
    
  0.429
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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