STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g13506DDE_Tnp_1_7 domain-containing protein. (233 aa)    
Predicted Functional Partners:
PC110_g23685
DDE_Tnp_1_7 domain-containing protein.
  
     0.518
PC110_g17286
DDE_Tnp_1_7 domain-containing protein.
 
     0.514
PC110_g53
DDE_Tnp_1_7 domain-containing protein.
  
     0.512
PC110_g15043
DDE_Tnp_1_7 domain-containing protein.
  
     0.509
PC110_g8943
DDE_Tnp_1_7 domain-containing protein.
  
     0.499
PC110_g21052
DDE_Tnp_1_7 domain-containing protein.
  
     0.489
PC110_g20504
DDE_Tnp_1_7 domain-containing protein.
  
     0.485
PC110_g10936
DDE_Tnp_1_7 domain-containing protein.
  
     0.481
PC110_g15225
DDE_Tnp_1_7 domain-containing protein.
  
     0.476
PC110_g5926
DDE_Tnp_1_7 domain-containing protein.
  
     0.476
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
Server load: low (18%) [HD]