STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g13241STAS domain-containing protein. (963 aa)    
Predicted Functional Partners:
PC110_g1819
Uncharacterized protein; Belongs to the complex I LYR family.
    
   0.550
PC110_g16983
Glutamine synthetase.
     
 0.540
PC110_g10957
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.516
PC110_g3639
Double-strand break repair protein; Belongs to the MRE11/RAD32 family.
   
   0.494
PC110_g9308
Uncharacterized protein.
    
 0.472
PC110_g15858
Uncharacterized protein.
   
   0.456
PC110_g6302
Ras-like GTP-binding protein.
   
   0.456
PC110_g5062
Uncharacterized protein.
   
   0.456
PC110_g15660
Uncharacterized protein.
    
  0.450
PC110_g3660
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
  0.448
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.