Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PC110_g1154 | PC110_g13289 | A0A329T299 | A0A329S0X5 | MPN domain-containing protein. | LisH domain-containing protein. | 0.641 |
PC110_g1154 | PC110_g16765 | A0A329T299 | A0A329RQ71 | MPN domain-containing protein. | RING-type domain-containing protein. | 0.891 |
PC110_g1154 | PC110_g2420 | A0A329T299 | A0A329SXU5 | MPN domain-containing protein. | Cullin-4; Belongs to the cullin family. | 0.931 |
PC110_g1154 | PC110_g4464 | A0A329T299 | A0A329STT8 | MPN domain-containing protein. | DNA damage-binding protein 1a. | 0.898 |
PC110_g12942 | PC110_g13289 | A0A329S1T3 | A0A329S0X5 | Deoxynucleoside triphosphate triphosphohydrolase. | LisH domain-containing protein. | 0.910 |
PC110_g12942 | PC110_g2420 | A0A329S1T3 | A0A329SXU5 | Deoxynucleoside triphosphate triphosphohydrolase. | Cullin-4; Belongs to the cullin family. | 0.407 |
PC110_g13289 | PC110_g1154 | A0A329S0X5 | A0A329T299 | LisH domain-containing protein. | MPN domain-containing protein. | 0.641 |
PC110_g13289 | PC110_g12942 | A0A329S0X5 | A0A329S1T3 | LisH domain-containing protein. | Deoxynucleoside triphosphate triphosphohydrolase. | 0.910 |
PC110_g13289 | PC110_g16292 | A0A329S0X5 | A0A329RRK0 | LisH domain-containing protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.812 |
PC110_g13289 | PC110_g16765 | A0A329S0X5 | A0A329RQ71 | LisH domain-containing protein. | RING-type domain-containing protein. | 0.915 |
PC110_g13289 | PC110_g18816 | A0A329S0X5 | A0A329RJ47 | LisH domain-containing protein. | Uncharacterized protein. | 0.641 |
PC110_g13289 | PC110_g21004 | A0A329S0X5 | A0A329RDG6 | LisH domain-containing protein. | BHLH domain-containing protein. | 0.812 |
PC110_g13289 | PC110_g2420 | A0A329S0X5 | A0A329SXU5 | LisH domain-containing protein. | Cullin-4; Belongs to the cullin family. | 0.983 |
PC110_g13289 | PC110_g4464 | A0A329S0X5 | A0A329STT8 | LisH domain-containing protein. | DNA damage-binding protein 1a. | 0.990 |
PC110_g13289 | PC110_g8263 | A0A329S0X5 | A0A329SIS4 | LisH domain-containing protein. | BHLH domain-containing protein. | 0.812 |
PC110_g13289 | PC110_g8539 | A0A329S0X5 | A0A329SE61 | LisH domain-containing protein. | HD domain-containing protein. | 0.910 |
PC110_g16292 | PC110_g13289 | A0A329RRK0 | A0A329S0X5 | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | LisH domain-containing protein. | 0.812 |
PC110_g16292 | PC110_g4464 | A0A329RRK0 | A0A329STT8 | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | DNA damage-binding protein 1a. | 0.725 |
PC110_g16765 | PC110_g1154 | A0A329RQ71 | A0A329T299 | RING-type domain-containing protein. | MPN domain-containing protein. | 0.891 |
PC110_g16765 | PC110_g13289 | A0A329RQ71 | A0A329S0X5 | RING-type domain-containing protein. | LisH domain-containing protein. | 0.915 |
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