STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g12646Protein kinase domain-containing protein. (783 aa)    
Predicted Functional Partners:
PC110_g10189
WD_REPEATS_REGION domain-containing protein.
   
 
 0.881
PC110_g5988
Uncharacterized protein.
    
 
 0.798
PC110_g6280
Ubiquitin-like domain-containing protein.
    
 0.709
PC110_g6219
Protein kinase domain-containing protein.
  
 
 
0.703
PC110_g4826
Protein kinase domain-containing protein.
  
 
  0.701
PC110_g16389
Protein kinase domain-containing protein.
  
 
  0.694
PC110_g9734
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.664
PC110_g13143
Uncharacterized protein.
    
 
 0.654
PC110_g100
Serine/threonine-protein kinase PLK.
    
 
 0.654
PC110_g686
Serine-protein kinase; Belongs to the PI3/PI4-kinase family.
    
 0.618
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.