STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g11087Uncharacterized protein. (825 aa)    
Predicted Functional Partners:
PC110_g14369
Uncharacterized protein.
    
 0.621
PC110_g6301
Autophagy-related protein.
    
  0.611
PC110_g15002
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.599
PC110_g7581
Uncharacterized protein.
    
 0.593
PC110_g13143
Uncharacterized protein.
    
 0.494
PC110_g6219
Protein kinase domain-containing protein.
    
 0.494
PC110_g100
Serine/threonine-protein kinase PLK.
    
 0.494
PC110_g7691
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.465
PC110_g6686
Cytoskeleton-associated protein 5.
    
 
 0.449
PC110_g9520
ANK_REP_REGION domain-containing protein.
    
  0.446
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.