STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g9913Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (328 aa)    
Predicted Functional Partners:
PC110_g9010
Uncharacterized protein.
   
 0.994
PC110_g3946
S5A_REDUCTASE domain-containing protein.
   
 0.994
PC110_g13632
Stearoyl-CoA desaturase 5; Belongs to the fatty acid desaturase type 1 family.
   
 0.940
PC110_g3599
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 0.940
PC110_g6426
Elongation of fatty acids protein.
    
 0.926
PC110_g3617
Elongation of fatty acids protein.
    
 0.926
PC110_g13407
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 0.914
PC110_g13267
Elongation of fatty acids protein.
     
 0.912
PC110_g6427
Elongation of fatty acids protein.
    
 0.893
PC110_g11108
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
  0.875
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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