STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g10832Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (206 aa)    
Predicted Functional Partners:
PC110_g11798
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
    
 
 0.821
PC110_g613
Uncharacterized protein; Belongs to the peptidase C1 family.
    
 
 0.821
PC110_g20083
Pre-mRNA-processing factor 19 2.
    
 0.807
PC110_g522
Pre-mRNA-splicing factor.
    
 0.804
PC110_g20542
SNW/SKI-interacting protein.
    
 0.801
PC110_g14432
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.797
PC110_g4755
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.783
PC110_g12610
Nucleoporin_N domain-containing protein.
   
 0.771
PC110_g13382
Uncharacterized protein.
    
 0.763
PC110_g1548
C3H1-type domain-containing protein.
   
  0.749
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.