Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PC110_g10116 | PC110_g10231 | A0A329SA89 | A0A329SCW9 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PC110_g10116 | PC110_g11676 | A0A329SA89 | A0A329S5U8 | Sm domain-containing protein. | NACHT domain-containing protein. | 0.741 |
PC110_g10116 | PC110_g15977 | A0A329SA89 | A0A329RVJ9 | Sm domain-containing protein. | Uncharacterized protein. | 0.867 |
PC110_g10116 | PC110_g5403 | A0A329SA89 | A0A329SP48 | Sm domain-containing protein. | SMN domain-containing protein. | 0.955 |
PC110_g10116 | PC110_g8523 | A0A329SA89 | A0A329SGF1 | Sm domain-containing protein. | Uncharacterized protein. | 0.630 |
PC110_g10231 | PC110_g10116 | A0A329SCW9 | A0A329SA89 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.999 |
PC110_g10231 | PC110_g11676 | A0A329SCW9 | A0A329S5U8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | NACHT domain-containing protein. | 0.734 |
PC110_g10231 | PC110_g15977 | A0A329SCW9 | A0A329RVJ9 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.820 |
PC110_g10231 | PC110_g5403 | A0A329SCW9 | A0A329SP48 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | SMN domain-containing protein. | 0.968 |
PC110_g10231 | PC110_g8523 | A0A329SCW9 | A0A329SGF1 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.646 |
PC110_g11676 | PC110_g10116 | A0A329S5U8 | A0A329SA89 | NACHT domain-containing protein. | Sm domain-containing protein. | 0.741 |
PC110_g11676 | PC110_g10231 | A0A329S5U8 | A0A329SCW9 | NACHT domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.734 |
PC110_g11676 | PC110_g15977 | A0A329S5U8 | A0A329RVJ9 | NACHT domain-containing protein. | Uncharacterized protein. | 0.743 |
PC110_g11676 | PC110_g5403 | A0A329S5U8 | A0A329SP48 | NACHT domain-containing protein. | SMN domain-containing protein. | 0.871 |
PC110_g11676 | PC110_g8523 | A0A329S5U8 | A0A329SGF1 | NACHT domain-containing protein. | Uncharacterized protein. | 0.659 |
PC110_g15159 | PC110_g7483 | A0A329RV36 | A0A329SHM8 | ERCC4 domain-containing protein. | DNA polymerase. | 0.680 |
PC110_g15159 | PC110_g8523 | A0A329RV36 | A0A329SGF1 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.626 |
PC110_g15159 | PC110_g9402 | A0A329RV36 | A0A329SCB6 | ERCC4 domain-containing protein. | Fanconi anemia group M protein. | 0.999 |
PC110_g15977 | PC110_g10116 | A0A329RVJ9 | A0A329SA89 | Uncharacterized protein. | Sm domain-containing protein. | 0.867 |
PC110_g15977 | PC110_g10231 | A0A329RVJ9 | A0A329SCW9 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.820 |
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