Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PC110_g12701 | PC110_g14432 | A0A329S328 | A0A329RXC3 | RanBD1 domain-containing protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.949 |
PC110_g12701 | PC110_g22769 | A0A329S328 | A0A329RBZ2 | RanBD1 domain-containing protein. | Uncharacterized protein. | 0.957 |
PC110_g12701 | PC110_g4780 | A0A329S328 | A0A329SQX6 | RanBD1 domain-containing protein. | Importin subunit beta-1. | 0.787 |
PC110_g12701 | PC110_g7586 | A0A329S328 | A0A329SJ57 | RanBD1 domain-containing protein. | Exportin-2. | 0.622 |
PC110_g12701 | PC110_g7767 | A0A329S328 | A0A329SJR3 | RanBD1 domain-containing protein. | RanBP2-type domain-containing protein. | 0.957 |
PC110_g12701 | PC110_g7882 | A0A329S328 | A0A329SGN0 | RanBD1 domain-containing protein. | Uncharacterized protein. | 0.700 |
PC110_g12701 | PC110_g8066 | A0A329S328 | A0A329SJ96 | RanBD1 domain-containing protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.673 |
PC110_g12701 | PC110_g9996 | A0A329S328 | A0A329SA60 | RanBD1 domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.687 |
PC110_g14070 | PC110_g4780 | A0A329RY88 | A0A329SQX6 | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | Importin subunit beta-1. | 0.940 |
PC110_g14070 | PC110_g8066 | A0A329RY88 | A0A329SJ96 | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.708 |
PC110_g14369 | PC110_g8066 | A0A329RXF6 | A0A329SJ96 | Uncharacterized protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.673 |
PC110_g14369 | PC110_g9996 | A0A329RXF6 | A0A329SA60 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.401 |
PC110_g14432 | PC110_g12701 | A0A329RXC3 | A0A329S328 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RanBD1 domain-containing protein. | 0.949 |
PC110_g14432 | PC110_g22769 | A0A329RXC3 | A0A329RBZ2 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Uncharacterized protein. | 0.952 |
PC110_g14432 | PC110_g4780 | A0A329RXC3 | A0A329SQX6 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Importin subunit beta-1. | 0.986 |
PC110_g14432 | PC110_g7586 | A0A329RXC3 | A0A329SJ57 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Exportin-2. | 0.938 |
PC110_g14432 | PC110_g7767 | A0A329RXC3 | A0A329SJR3 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RanBP2-type domain-containing protein. | 0.952 |
PC110_g14432 | PC110_g7882 | A0A329RXC3 | A0A329SGN0 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Uncharacterized protein. | 0.917 |
PC110_g14432 | PC110_g8066 | A0A329RXC3 | A0A329SJ96 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.689 |
PC110_g14432 | PC110_g9996 | A0A329RXC3 | A0A329SA60 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Nuclear cap-binding protein subunit 2. | 0.904 |
page 1 of 4