STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g8066Importin subunit alpha; Belongs to the importin alpha family. (549 aa)    
Predicted Functional Partners:
PC110_g7586
Exportin-2.
  
 0.905
PC110_g4780
Importin subunit beta-1.
   
 0.893
PC110_g14070
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.708
PC110_g7882
Uncharacterized protein.
    
 
 0.695
PC110_g14432
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.689
PC110_g9996
Nuclear cap-binding protein subunit 2.
    
 
 0.689
PC110_g14369
Uncharacterized protein.
    
 
 0.673
PC110_g12701
RanBD1 domain-containing protein.
   
 
 0.673
PC110_g22769
Uncharacterized protein.
    
 
 0.656
PC110_g7767
RanBP2-type domain-containing protein.
    
 
 0.656
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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