STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g6019PfkB domain-containing protein. (707 aa)    
Predicted Functional Partners:
PC110_g15492
PNP_UDP_1 domain-containing protein.
  
 
  0.863
PC110_g3522
PNP_UDP_1 domain-containing protein.
  
 
  0.863
PC110_g19384
PNP_UDP_1 domain-containing protein.
    
  0.852
PC110_g19383
PPM-type phosphatase domain-containing protein; Belongs to the PP2C family.
    
  0.841
PC110_g14344
Uncharacterized protein.
  
 
  0.821
PC110_g15479
GRIP domain-containing protein.
  
 
  0.791
PC110_g17491
IU_nuc_hydro domain-containing protein.
  
 
  0.725
PC110_g13692
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
   
 
  0.704
PC110_g12237
Uncharacterized protein.
  
 
 0.697
PC110_g10174
PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.697
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.