STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g6185Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
PC110_g14037
Heat shock protein 17.
  
 0.793
PC110_g10064
TNF receptor-associated protein 1.
  
 0.770
PC110_g2041
Heat shock protein 81-3.
  
 0.770
PC110_g14574
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.738
PC110_g2335
Endoplasmin.
  
 0.727
PC110_g11428
Heat shock protein 14.
  
 0.722
PC110_g4123
TPR_REGION domain-containing protein.
  
 0.722
PC110_g11499
Uncharacterized protein.
  
 0.715
PC110_g5232
Luminal-binding protein 5; Belongs to the heat shock protein 70 family.
  
 0.715
PC110_g14046
Chaperone protein; Belongs to the heat shock protein 70 family.
  
 0.691
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.