STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g5881alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (1219 aa)    
Predicted Functional Partners:
PC110_g11842
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
 
0.944
PC110_g16925
Uncharacterized protein.
   
 
 0.725
PC110_g11366
Uncharacterized protein.
    
 
 0.722
PC110_g9629
Protein disulfide-isomerase.
    
 
 0.722
PC110_g5585
Thioredoxin domain-containing protein.
    
 
 0.722
PC110_g17150
Uncharacterized protein.
    
 
 0.610
PC110_g12818
Calnexin.
    
 
 0.610
PC110_g19891
BZIP domain-containing protein.
     
 0.573
PC110_g19894
BZIP domain-containing protein.
     
 0.573
PC110_g15272
BZIP domain-containing protein.
     
 0.573
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.