STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g4745Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
PC110_g7649
Uncharacterized protein.
    
 0.890
PC110_g7483
DNA polymerase.
    
 0.889
PC110_g2897
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.861
PC110_g779
DNA polymerase.
    
 0.857
PC110_g3386
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.839
PC110_g11854
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6.
    
 0.826
PC110_g7839
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5.
    
 0.826
PC110_g6574
Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9.
    
 0.826
PC110_g4817
Uncharacterized protein.
    
 0.826
PC110_g9427
Uncharacterized protein.
     
 0.821
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.