STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g3140Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
PC110_g2993
Sushi domain-containing protein.
    
  0.529
PC110_g2897
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.529
PC110_g9958
Mannose-1-phosphate guanyltransferase beta.
     
 0.484
PC110_g5081
Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
   
 
 0.482
PC110_g4991
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.474
PC110_g3755
Fe2OG dioxygenase domain-containing protein.
    
 0.474
PC110_g11092
Alpha-1,3/1,6-mannosyltransferase.
     
 0.470
PC110_g8294
UDP-sugar pyrophosphorylase 1.
     
 0.447
PC110_g607
UDP-N-acetylglucosamine diphosphorylase 2.
     
 0.447
PC110_g2364
Alpha-amylase.
    
  0.440
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.