STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g4388Uncharacterized protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (283 aa)    
Predicted Functional Partners:
PC110_g7581
Uncharacterized protein.
   
 
 0.734
PC110_g8510
Uncharacterized protein.
   
 
 0.650
PC110_g5026
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.573
PC110_g10080
Uncharacterized protein.
   
  
 0.561
PC110_g7781
HORMA domain-containing protein.
   
 
  0.522
PC110_g12393
WD_REPEATS_REGION domain-containing protein.
     
 0.485
PC110_g16810
WD_REPEATS_REGION domain-containing protein.
   
 
 0.472
PC110_g14651
Protein FIZZY-RELATED 2.
   
 
 0.472
PC110_g12028
Uncharacterized protein.
   
 
 0.472
PC110_g9256
Uncharacterized protein.
   
 
 0.472
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
Server load: low (24%) [HD]