Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PC110_g11415 | PC110_g11855 | A0A329S6T5 | A0A329S5B9 | Malic enzyme. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.933 |
PC110_g11415 | PC110_g13082 | A0A329S6T5 | A0A329S1N0 | Malic enzyme. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.929 |
PC110_g11415 | PC110_g14429 | A0A329S6T5 | A0A329RXC7 | Malic enzyme. | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | 0.672 |
PC110_g11415 | PC110_g17095 | A0A329S6T5 | A0A329RTQ4 | Malic enzyme. | Malate dehydrogenase. | 0.946 |
PC110_g11415 | PC110_g18792 | A0A329S6T5 | A0A329RJ73 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.924 |
PC110_g11415 | PC110_g2078 | A0A329S6T5 | A0A329SYM6 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.944 |
PC110_g11415 | PC110_g2215 | A0A329S6T5 | A0A329T0B9 | Malic enzyme. | Malate dehydrogenase, cytoplasmic; Belongs to the LDH/MDH superfamily. | 0.946 |
PC110_g11415 | PC110_g4120 | A0A329S6T5 | A0A329STA0 | Malic enzyme. | Aspartate aminotransferase. | 0.626 |
PC110_g11415 | PC110_g7691 | A0A329S6T5 | A0A329SH28 | Malic enzyme. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.934 |
PC110_g11415 | PC110_g783 | A0A329S6T5 | A0A329T2G2 | Malic enzyme. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.933 |
PC110_g11855 | PC110_g11415 | A0A329S5B9 | A0A329S6T5 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Malic enzyme. | 0.933 |
PC110_g11855 | PC110_g13082 | A0A329S5B9 | A0A329S1N0 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.919 |
PC110_g11855 | PC110_g17095 | A0A329S5B9 | A0A329RTQ4 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Malate dehydrogenase. | 0.880 |
PC110_g11855 | PC110_g2078 | A0A329S5B9 | A0A329SYM6 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.937 |
PC110_g11855 | PC110_g2215 | A0A329S5B9 | A0A329T0B9 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Malate dehydrogenase, cytoplasmic; Belongs to the LDH/MDH superfamily. | 0.880 |
PC110_g11855 | PC110_g7691 | A0A329S5B9 | A0A329SH28 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.922 |
PC110_g11855 | PC110_g783 | A0A329S5B9 | A0A329T2G2 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.847 |
PC110_g13082 | PC110_g11415 | A0A329S1N0 | A0A329S6T5 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Malic enzyme. | 0.929 |
PC110_g13082 | PC110_g11855 | A0A329S1N0 | A0A329S5B9 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.919 |
PC110_g13082 | PC110_g14429 | A0A329S1N0 | A0A329RXC7 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | 0.631 |
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