STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC110_g282Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
PC110_g14529
Uncharacterized protein.
    
 0.770
PC110_g9228
Bardet-Biedl syndrome 7 protein.
    
 0.745
PC110_g7976
Tetratricopeptide repeat protein 8.
    
  0.744
PC110_g11676
NACHT domain-containing protein.
    
 0.741
PC110_g1878
Uncharacterized protein.
    
 0.706
PC110_g2294
DUF3677 domain-containing protein.
    
 0.703
PC110_g16985
Very long-chain acyl-CoA synthetase.
    
 0.689
PC110_g1189
Bardet-Biedl syndrome 2.
    
 0.689
PC110_g7433
Anaphase-promoting complex subunit 6.
    
 0.687
PC110_g1536
Uncharacterized protein.
    
 0.683
Your Current Organism:
Phytophthora cactorum
NCBI taxonomy Id: 29920
Other names: P. cactorum, Phytophthora sp. 748, Phytophthora sp. 753, Phytophthora sp. 764A, Phytophthora sp. 798, Phytophthora sp. 813, Phytophthora sp. CSL 20316642
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.