Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH94717.1 | SHH94751.1 | SAMN02745129_3220 | SAMN02745129_3222 | Protein NrfD. | Cytochrome c-type protein NrfB. | 0.962 |
| SHH94717.1 | SHI02815.1 | SAMN02745129_3220 | SAMN02745129_3667 | Protein NrfD. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.422 |
| SHH94717.1 | SHI15503.1 | SAMN02745129_3220 | SAMN02745129_4443 | Protein NrfD. | Decaheme c-type cytochrome, DmsE family. | 0.435 |
| SHH94717.1 | napA | SAMN02745129_3220 | SAMN02745129_1115 | Protein NrfD. | Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.772 |
| SHH94717.1 | nrfA | SAMN02745129_3220 | SAMN02745129_0439 | Protein NrfD. | Nitrite reductase (cytochrome c-552); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. | 0.914 |
| SHH94751.1 | SHH94717.1 | SAMN02745129_3222 | SAMN02745129_3220 | Cytochrome c-type protein NrfB. | Protein NrfD. | 0.962 |
| SHH94751.1 | SHI02815.1 | SAMN02745129_3222 | SAMN02745129_3667 | Cytochrome c-type protein NrfB. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.619 |
| SHH94751.1 | SHI15503.1 | SAMN02745129_3222 | SAMN02745129_4443 | Cytochrome c-type protein NrfB. | Decaheme c-type cytochrome, DmsE family. | 0.501 |
| SHH94751.1 | SHI15560.1 | SAMN02745129_3222 | SAMN02745129_4451 | Cytochrome c-type protein NrfB. | NapC/NirT cytochrome c family, N-terminal region. | 0.501 |
| SHH94751.1 | SHI15584.1 | SAMN02745129_3222 | SAMN02745129_4454 | Cytochrome c-type protein NrfB. | Cytochrome c-type protein NapC. | 0.501 |
| SHH94751.1 | SHI15588.1 | SAMN02745129_3222 | SAMN02745129_4455 | Cytochrome c-type protein NrfB. | Periplasmic nitrate reductase subunit NapC. | 0.501 |
| SHH94751.1 | SHI15804.1 | SAMN02745129_3222 | SAMN02745129_4490 | Cytochrome c-type protein NrfB. | Tetraheme cytochrome c subunit of nitrate or TMAO reductase. | 0.501 |
| SHH94751.1 | hcp | SAMN02745129_3222 | SAMN02745129_1764 | Cytochrome c-type protein NrfB. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.403 |
| SHH94751.1 | nrfA | SAMN02745129_3222 | SAMN02745129_0439 | Cytochrome c-type protein NrfB. | Nitrite reductase (cytochrome c-552); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. | 0.859 |
| SHI02815.1 | SHH94717.1 | SAMN02745129_3667 | SAMN02745129_3220 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protein NrfD. | 0.422 |
| SHI02815.1 | SHH94751.1 | SAMN02745129_3667 | SAMN02745129_3222 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c-type protein NrfB. | 0.619 |
| SHI02815.1 | SHI15503.1 | SAMN02745129_3667 | SAMN02745129_4443 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Decaheme c-type cytochrome, DmsE family. | 0.790 |
| SHI02815.1 | SHI15560.1 | SAMN02745129_3667 | SAMN02745129_4451 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NapC/NirT cytochrome c family, N-terminal region. | 0.790 |
| SHI02815.1 | SHI15584.1 | SAMN02745129_3667 | SAMN02745129_4454 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c-type protein NapC. | 0.790 |
| SHI02815.1 | SHI15588.1 | SAMN02745129_3667 | SAMN02745129_4455 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Periplasmic nitrate reductase subunit NapC. | 0.790 |
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