STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG85710.1Multisubunit sodium/proton antiporter, MrpE subunit. (156 aa)    
Predicted Functional Partners:
SHG85560.1
Multisubunit sodium/proton antiporter, MrpC subunit.
 
 
 0.999
SHG85612.1
Multisubunit sodium/proton antiporter, MrpB subunit.
 
 
 0.999
SHG85645.1
Multisubunit sodium/proton antiporter, MrpG subunit.
 
 
 0.999
SHG85674.1
Multisubunit sodium/proton antiporter, MrpF subunit.
 
 
 0.999
SHI19300.1
Multicomponent Na+:H+ antiporter subunit A.
  
 
 0.999
SHG85427.1
Multisubunit sodium/proton antiporter, MrpD subunit.
 
 
 0.998
SHG85523.1
Multisubunit sodium/proton antiporter, MrpD subunit.
 
 
 0.998
SHG85491.1
Multisubunit sodium/proton antiporter, MrpD subunit.
 
 
 0.996
SHI19266.1
Multicomponent Na+:H+ antiporter subunit G.
 
 
 0.994
SHI19273.1
Multicomponent Na+:H+ antiporter subunit F.
 
 
 0.988
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.