STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG92561.1NADP-dependent alcohol dehydrogenase. (386 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
    0.881
SHI09447.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
0.853
SHH21499.1
NADP-dependent alcohol dehydrogenase.
  
  
 
0.814
SHH37781.1
Hypothetical protein.
   
    0.692
SHH20989.1
Transcriptional regulator, AraC family.
   
    0.605
SHI16166.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.605
SHG92600.1
AraC-type DNA-binding protein.
       0.508
SHI15331.1
2,5-diketo-D-gluconate reductase B.
  
 
 0.472
SHI19631.1
Alcohol dehydrogenase (NADP+).
  
 
 0.472
SHI23840.1
GMP synthase-Glutamine amidotransferase.
  
    0.466
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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