STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH74940.1Alpha-glucosidase. (544 aa)    
Predicted Functional Partners:
SHI09280.1
PTS system, glucose-specific IIC component.
  
 
 0.956
SHI10844.1
PTS system, glucose-specific IIC component.
  
 
 0.956
SHH73951.1
Fructokinase.
    
 0.871
SHI11193.1
Sucrose phosphorylase.
  
  
 
0.847
SHG90857.1
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.760
SHH74915.1
Maltose phosphorylase.
 
 
 0.749
SHI16229.1
Beta-glucosidase.
 
 
 0.607
SHH74895.1
Beta-phosphoglucomutase.
 
 
 0.594
SHH74637.1
Maltose/moltooligosaccharide transporter.
 
  
 0.525
SHH74618.1
Glycosidase.
 
     0.506
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.