STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH76224.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (179 aa)    
Predicted Functional Partners:
SHH76109.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.892
SHI21487.1
NADPH-glutathione reductase.
  
 0.875
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.863
SHG82422.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
     
 0.859
SHI04995.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 
0.848
SHH37649.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
     
 0.835
SHH53304.1
Protein of unknown function.
    
 0.813
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.674
SHH94596.1
Catalase; Belongs to the catalase family.
  
 
 0.670
SHI20893.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
   
 0.559
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.