STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI01373.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
SHH97532.1
Hypothetical protein.
 
      0.798
SHI01387.1
HDIG domain-containing protein; Manually curated.
       0.773
SHI01357.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.605
SHH79418.1
tRNA G46 methylase TrmB.
   
    0.557
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.557
SHH95869.1
Type I restriction enzyme, R subunit.
   
    0.440
SHI01402.1
Multiple antibiotic resistance protein.
       0.413
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.