STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI05357.1Putative esterase. (309 aa)    
Predicted Functional Partners:
SHH93839.1
Tellurite resistance protein TehA.
   
    0.822
menF
Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
  
    0.652
SHH74804.1
Oligosaccharide 4-alpha-D-glucosyltransferase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.597
SHH74734.1
Glycosidase.
  
  0.596
SHH74825.1
Glycosidase.
 
  
  0.560
SHH74637.1
Maltose/moltooligosaccharide transporter.
  
    0.537
SHH74618.1
Glycosidase.
  
  0.527
SHI23731.1
MioC protein.
  
    0.490
SHI18753.1
Flavodoxin I; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
  
    0.490
SHI05347.1
Outer membrane protein.
       0.469
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.