STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI11039.14Fe-4S dicluster domain-containing protein. (83 aa)    
Predicted Functional Partners:
SHI15428.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
  
 0.999
SHI19300.1
Multicomponent Na+:H+ antiporter subunit A.
  
 0.999
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.992
SHI06228.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.990
SHG85491.1
Multisubunit sodium/proton antiporter, MrpD subunit.
  
 0.989
SHI06260.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 
 0.989
SHG91989.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.988
SHG85612.1
Multisubunit sodium/proton antiporter, MrpB subunit.
  
 
 0.987
SHG79896.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
 0.983
SHG93185.1
NAD dependent epimerase/dehydratase family protein.
   
 0.983
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.