STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI15588.1Periplasmic nitrate reductase subunit NapC. (196 aa)    
Predicted Functional Partners:
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 0.983
SHG90821.1
Periplasmic nitrate reductase subunit NapB.
 
 
 0.981
SHI15547.1
Decaheme-associated outer membrane protein, MtrB/PioB family.
  
 
 0.860
SHI21147.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.843
nrfA
Nitrite reductase (cytochrome c-552); Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
  
 0.833
SHH94159.1
Nitrite reductase (cytochrome c-552).
  
 0.833
SHH94170.1
Nitrite reductase (cytochrome c-552).
  
 0.833
SHH74349.1
Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.814
SHI03418.1
Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.814
SHI03478.1
Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.814
Your Current Organism:
Ferrimonas marina
NCBI taxonomy Id: 299255
Other names: DSM 16917, F. marina, Ferrimonas marina Katsuta et al. 2005, MBIC 06480, NBRC 102583, strain A4D-4
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