STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX10473.1Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
APX10463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
APX10464.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.801
APX12263.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
APX10475.1
Branched chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.614
APX10474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
APX13572.1
2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
APX10471.1
NifU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.466
APX10476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
APX10469.1
Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.443
APX13047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.443
Your Current Organism:
Tateyamaria omphalii
NCBI taxonomy Id: 299262
Other names: IAM 15108, JCM 21569, KCTC 12333, T. omphalii, Tateyamaria omphalii Kurahashi and Yokota 2008 emend. Sass et al. 2010, strain MKT107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.