Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC114765830 | LOC114796148 | ENSDCDP00000035573 | ENSDCDP00000000013 | Neogenin-like. | E3 ubiquitin-protein ligase TRIM9. | 0.569 |
LOC114765830 | NEO1 | ENSDCDP00000035573 | ENSDCDP00000024636 | Neogenin-like. | Neogenin 1. | 0.807 |
LOC114767888 | LOC114796148 | ENSDCDP00000050886 | ENSDCDP00000000013 | F-box/WD repeat-containing protein 11. | E3 ubiquitin-protein ligase TRIM9. | 0.574 |
LOC114767888 | fbxw11 | ENSDCDP00000050886 | ENSDCDP00000062421 | F-box/WD repeat-containing protein 11. | F-box and WD repeat domain containing 11. | 0.867 |
LOC114770500 | LOC114796148 | ENSDCDP00000053196 | ENSDCDP00000000013 | Immunoglobulin superfamily DCC subclass member 3-like. | E3 ubiquitin-protein ligase TRIM9. | 0.455 |
LOC114783712 | LOC114796148 | ENSDCDP00000051215 | ENSDCDP00000000013 | Neogenin-like. | E3 ubiquitin-protein ligase TRIM9. | 0.569 |
LOC114790310 | LOC114796148 | ENSDCDP00000044392 | ENSDCDP00000000013 | Immunoglobulin superfamily DCC subclass member 3-like. | E3 ubiquitin-protein ligase TRIM9. | 0.455 |
LOC114796148 | LOC114765830 | ENSDCDP00000000013 | ENSDCDP00000035573 | E3 ubiquitin-protein ligase TRIM9. | Neogenin-like. | 0.569 |
LOC114796148 | LOC114767888 | ENSDCDP00000000013 | ENSDCDP00000050886 | E3 ubiquitin-protein ligase TRIM9. | F-box/WD repeat-containing protein 11. | 0.574 |
LOC114796148 | LOC114770500 | ENSDCDP00000000013 | ENSDCDP00000053196 | E3 ubiquitin-protein ligase TRIM9. | Immunoglobulin superfamily DCC subclass member 3-like. | 0.455 |
LOC114796148 | LOC114783712 | ENSDCDP00000000013 | ENSDCDP00000051215 | E3 ubiquitin-protein ligase TRIM9. | Neogenin-like. | 0.569 |
LOC114796148 | LOC114790310 | ENSDCDP00000000013 | ENSDCDP00000044392 | E3 ubiquitin-protein ligase TRIM9. | Immunoglobulin superfamily DCC subclass member 3-like. | 0.455 |
LOC114796148 | NEO1 | ENSDCDP00000000013 | ENSDCDP00000024636 | E3 ubiquitin-protein ligase TRIM9. | Neogenin 1. | 0.569 |
LOC114796148 | dcc | ENSDCDP00000000013 | ENSDCDP00000034656 | E3 ubiquitin-protein ligase TRIM9. | DCC netrin 1 receptor. | 0.569 |
LOC114796148 | fbxw11 | ENSDCDP00000000013 | ENSDCDP00000062421 | E3 ubiquitin-protein ligase TRIM9. | F-box and WD repeat domain containing 11. | 0.574 |
LOC114796148 | igdcc3 | ENSDCDP00000000013 | ENSDCDP00000041615 | E3 ubiquitin-protein ligase TRIM9. | Immunoglobulin superfamily DCC subclass member 3. | 0.455 |
LOC114796148 | igdcc4 | ENSDCDP00000000013 | ENSDCDP00000041367 | E3 ubiquitin-protein ligase TRIM9. | Immunoglobulin superfamily DCC subclass member 4. | 0.566 |
NEO1 | LOC114765830 | ENSDCDP00000024636 | ENSDCDP00000035573 | Neogenin 1. | Neogenin-like. | 0.807 |
NEO1 | LOC114796148 | ENSDCDP00000024636 | ENSDCDP00000000013 | Neogenin 1. | E3 ubiquitin-protein ligase TRIM9. | 0.569 |
dcc | LOC114796148 | ENSDCDP00000034656 | ENSDCDP00000000013 | DCC netrin 1 receptor. | E3 ubiquitin-protein ligase TRIM9. | 0.569 |
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