STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sik2Salt inducible kinase 2. (888 aa)    
Predicted Functional Partners:
CRTC2
CREB-regulated transcription coactivator 1-like.
    
 0.939
LOC114781707
CREB-regulated transcription coactivator 3-like.
    
 0.939
crtc1
CREB regulated transcription coactivator 1.
    
 0.843
LOC114788404
cAMP-dependent protein kinase catalytic subunit beta.
    
 
0.742
LOC114794099
cAMP-dependent protein kinase catalytic subunit alpha.
    
 
0.742
LOC114785798
cAMP-dependent protein kinase catalytic subunit alpha-like.
    
 
0.742
LOC114772592
cAMP-dependent protein kinase catalytic subunit alpha-like.
    
 
0.742
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 
0.742
tubg1
Tubulin gamma 1.
    
  0.732
ENSDCDP00000027845
annotation not available
    
  0.718
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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