STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptrh1peptidyl-tRNA hydrolase 1 homolog. (287 aa)    
Predicted Functional Partners:
ola1
Obg like ATPase 1.
  
  
 0.961
LOC114784535
peptidyl-tRNA hydrolase ICT1, mitochondrial-like.
  
  
 0.906
gatb
glutamyl-tRNA amidotransferase subunit B.
  
 
  0.846
LOC114788491
glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like.
    
  0.794
ENSDCDP00000021270
glutaminyl-tRNA amidotransferase subunit QRSL1.
    
  0.794
faah2
Fatty acid amide hydrolase 2.
    
  0.794
faah
Fatty acid amide hydrolase.
    
  0.794
LOC114794591
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2.
  
  
 0.760
ctu1
Cytosolic thiouridylase subunit 1.
  
  
 0.760
LOC114800975
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2.
  
  
 0.760
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.