STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
man2b1Mannosidase alpha class 2B member 1. (992 aa)    
Predicted Functional Partners:
man2c1
Mannosidase alpha class 2C member 1.
     
 0.920
LOC114771707
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
   
 
 0.751
LOC114770728
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
   
 
 0.751
LOC114767191
Alpha-mannosidase 2x-like.
     
0.700
man2a1
Mannosidase alpha class 2A member 1.
     
0.700
man2a2
Mannosidase alpha class 2A member 2.
     
0.700
LOC114800297
Alpha-(1,6)-fucosyltransferase-like.
     
 0.667
LOC114791990
Alpha-(1,6)-fucosyltransferase-like.
     
 0.667
LOC114790759
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
   
 
 0.663
manba
Mannosidase beta.
   
 
 0.558
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.