STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114785485Lysosomal alpha-glucosidase-like. (514 aa)    
Predicted Functional Partners:
prkcsh
Protein kinase C substrate 80K-H.
   
 0.893
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.893
NUP54
Nucleoporin 54.
    
 0.805
mogs
Mannosyl-oligosaccharide glucosidase.
   
 0.791
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.786
rbks
Ribokinase.
  
 
 0.744
LOC114797675
Neutral alpha-glucosidase C-like.
  
  
 
0.738
nup35
Nucleoporin 35.
     
 0.723
ganab
Glucosidase II alpha subunit.
  
  
0.719
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.711
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.