STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mppe1Metallophosphoesterase 1. (437 aa)    
Predicted Functional Partners:
pgap3
post-GPI attachment to proteins phospholipase 3.
    
 
 0.830
skp1
S-phase kinase associated protein 1.
    
  0.744
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 
 0.667
pigb
Phosphatidylinositol glycan anchor biosynthesis class B.
    
 
 0.618
pgap2
post-GPI attachment to proteins 2.
    
 
 0.609
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
    
 
 0.602
mrpl40
Mitochondrial ribosomal protein L40.
      
 0.566
cdc27
Cell division cycle 27.
      
 0.566
ENSDCDP00000055464
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.566
pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
      
 0.566
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.